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乳酸脱氢酶A抑制剂的设计、合成与生物活性

Design, synthesis and biological evaluation of lactate dehydrogenase A inhibitors

  • 摘要: 人乳酸脱氢酶A(lactate dehydrogenase A, LDHA)是一种将丙酮酸转化为乳酸的NADH依赖型氧化还原酶,在肿瘤细胞的有氧糖酵解中至关重要。此外,LDHA在肝脏中还负责催化乙醛酸向草酸盐的转化,草酸盐过度累积会引发高草酸尿症。目前报道的代表性LDHA抑制剂有GNE-140、NCATS-SM1441及CHK-336等。本研究以NCATS-SM1441为先导物,在分析其与LDHA的共晶复合物结合模式基础上,保留关键的噻唑甲酸及芳环药效团,以结构简化的脲连接链替代原有的取代吡唑连接链,设计并合成了9个脲类目标化合物。随后,在构效关系和分子对接研究基础上,进一步设计了9个三氮唑类目标化合物。最终发现三氮唑类化合物25展现出最佳的体外LDHA酶抑制活性(IC50 = 1.59 μmol/L)。分子动力学模拟分析了化合物25与关键氨基酸残基的相互作用。最后,对化合物25进行了理化性质的预测和细胞毒性评价。本研究为未来开发具有更优成药性的新型LDHA抑制剂提供了实验依据。

     

    Abstract: Human lactate dehydrogenase A (LDHA) is an NADH-dependent oxidoreductase that catalyzes the conversion of pyruvate to lactate, playing a crucial role in the aerobic glycolysis of tumor cells. Additionally, LDHA is responsible for catalyzing the conversion of glyoxylate to oxalate in the liver, excessive accumulation of which leads to hyperoxaluria. Representative LDHA inhibitors reported to date include GNE-140, NCATS-SM1441, and CHK-336. In this study, NCATS-SM1441 was used as the lead compound. Based on the analysis of its cocrystal binding mode with LDH, the key carboxythiazole and aromatic pharmacophores were retained, while the original substituted pyrazole linker was replaced with urea linker moieties to simplify the structure. As a result, nine urea derivatives were designed and synthesized. Subsequently, on the basis of structure-activity relationship and molecular docking studies, nine target triazole compounds were further designed. Ultimately, triazole compound 25 was found to exhibit the most potent LDHA inhibitory activity (IC50 = 1.59 μmol/L) in vitro. Molecular dynamics simulations were employed to analyze the interactions between compound 25 and key amino acid residues. Finally, the prediction of physicochemical properties and the evaluation of cell viability were performed for compound 25. The study provides an experimental basis for future development of novel LDHA inhibitors with improved drugability.

     

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